Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMG41133.1 | SMG41138.1 | SAMN06296010_2573 | SAMN06296010_2574 | Transcriptional regulator, IclR family. | Gluconolactonase. | 0.805 |
SMG41133.1 | SMG41141.1 | SAMN06296010_2573 | SAMN06296010_2575 | Transcriptional regulator, IclR family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.569 |
SMG41133.1 | SMG41145.1 | SAMN06296010_2573 | SAMN06296010_2576 | Transcriptional regulator, IclR family. | O-acetylserine/cysteine efflux transporter. | 0.413 |
SMG41133.1 | SMG41164.1 | SAMN06296010_2573 | SAMN06296010_2577 | Transcriptional regulator, IclR family. | Hypothetical protein. | 0.401 |
SMG41138.1 | SMG41133.1 | SAMN06296010_2574 | SAMN06296010_2573 | Gluconolactonase. | Transcriptional regulator, IclR family. | 0.805 |
SMG41138.1 | SMG41141.1 | SAMN06296010_2574 | SAMN06296010_2575 | Gluconolactonase. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.556 |
SMG41138.1 | SMG41145.1 | SAMN06296010_2574 | SAMN06296010_2576 | Gluconolactonase. | O-acetylserine/cysteine efflux transporter. | 0.413 |
SMG41138.1 | SMG41164.1 | SAMN06296010_2574 | SAMN06296010_2577 | Gluconolactonase. | Hypothetical protein. | 0.401 |
SMG41138.1 | rplY | SAMN06296010_2574 | SAMN06296010_2578 | Gluconolactonase. | LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.426 |
SMG41141.1 | SMG41133.1 | SAMN06296010_2575 | SAMN06296010_2573 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, IclR family. | 0.569 |
SMG41141.1 | SMG41138.1 | SAMN06296010_2575 | SAMN06296010_2574 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Gluconolactonase. | 0.556 |
SMG41141.1 | SMG41145.1 | SAMN06296010_2575 | SAMN06296010_2576 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | O-acetylserine/cysteine efflux transporter. | 0.861 |
SMG41141.1 | SMG41164.1 | SAMN06296010_2575 | SAMN06296010_2577 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.539 |
SMG41145.1 | SMG41133.1 | SAMN06296010_2576 | SAMN06296010_2573 | O-acetylserine/cysteine efflux transporter. | Transcriptional regulator, IclR family. | 0.413 |
SMG41145.1 | SMG41138.1 | SAMN06296010_2576 | SAMN06296010_2574 | O-acetylserine/cysteine efflux transporter. | Gluconolactonase. | 0.413 |
SMG41145.1 | SMG41141.1 | SAMN06296010_2576 | SAMN06296010_2575 | O-acetylserine/cysteine efflux transporter. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.861 |
SMG41145.1 | SMG41164.1 | SAMN06296010_2576 | SAMN06296010_2577 | O-acetylserine/cysteine efflux transporter. | Hypothetical protein. | 0.746 |
SMG41145.1 | rplY | SAMN06296010_2576 | SAMN06296010_2578 | O-acetylserine/cysteine efflux transporter. | LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.433 |
SMG41164.1 | SMG41133.1 | SAMN06296010_2577 | SAMN06296010_2573 | Hypothetical protein. | Transcriptional regulator, IclR family. | 0.401 |
SMG41164.1 | SMG41138.1 | SAMN06296010_2577 | SAMN06296010_2574 | Hypothetical protein. | Gluconolactonase. | 0.401 |
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