STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG41579.1Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (871 aa)    
Predicted Functional Partners:
SMG41583.1
Assimilatory nitrite reductase (NAD(P)H) small subunit.
 
 0.999
SMG41595.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.993
SMG41592.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
 
 0.982
SMG38457.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
  
 0.966
SMG41572.1
uroporphyrinogen-III synthase.
 
  
 0.960
SMG37081.1
L-glutamine synthetase.
    
 0.953
SMG41600.1
Assimilatory nitrate reductase (NADH) beta subunit.
 
  
 
0.952
SMG41577.1
uroporphyrin-III C-methyltransferase.
  
 0.949
SMG41587.1
Sirohydrochlorin ferrochelatase.
 
 
 0.928
SMG37071.1
L-glutamine synthetase.
    
 0.923
Your Current Organism:
Agreia pratensis
NCBI taxonomy Id: 150121
Other names: A. pratensis, Agreia pratensis (Behrendt et al. 2002) Schumann et al. 2003, DSM 14246, JCM 12145, LMG 21000, LMG:21000, NBRC 103054, Subtercola pratensis, Subtercola pratensis Behrendt et al. 2002, Subtercola sp. P229/10, VKM Ac-2510, strain P 229/10
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