Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMG10157.1 | SMG41985.1 | SAMN06296010_0206 | SAMN06296010_2682 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Cupin domain-containing protein. | 0.444 |
SMG10157.1 | SMG42445.1 | SAMN06296010_0206 | SAMN06296010_2729 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.410 |
SMG10157.1 | SMG44354.1 | SAMN06296010_0206 | SAMN06296010_2855 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Mannose-6-phosphate isomerase, cupin superfamily. | 0.589 |
SMG14044.1 | SMG41985.1 | SAMN06296010_0505 | SAMN06296010_2682 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Cupin domain-containing protein. | 0.426 |
SMG41979.1 | SMG41985.1 | SAMN06296010_2681 | SAMN06296010_2682 | Hypothetical protein. | Cupin domain-containing protein. | 0.552 |
SMG41979.1 | SMG41988.1 | SAMN06296010_2681 | SAMN06296010_2683 | Hypothetical protein. | Hypothetical protein. | 0.453 |
SMG41985.1 | SMG10157.1 | SAMN06296010_2682 | SAMN06296010_0206 | Cupin domain-containing protein. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.444 |
SMG41985.1 | SMG14044.1 | SAMN06296010_2682 | SAMN06296010_0505 | Cupin domain-containing protein. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.426 |
SMG41985.1 | SMG41979.1 | SAMN06296010_2682 | SAMN06296010_2681 | Cupin domain-containing protein. | Hypothetical protein. | 0.552 |
SMG41985.1 | SMG41988.1 | SAMN06296010_2682 | SAMN06296010_2683 | Cupin domain-containing protein. | Hypothetical protein. | 0.623 |
SMG41985.1 | SMG42445.1 | SAMN06296010_2682 | SAMN06296010_2729 | Cupin domain-containing protein. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.444 |
SMG41985.1 | SMG44354.1 | SAMN06296010_2682 | SAMN06296010_2855 | Cupin domain-containing protein. | Mannose-6-phosphate isomerase, cupin superfamily. | 0.520 |
SMG41985.1 | SMG45659.1 | SAMN06296010_2682 | SAMN06296010_3030 | Cupin domain-containing protein. | Adenylosuccinate lyase. | 0.521 |
SMG41985.1 | sigA | SAMN06296010_2682 | SAMN06296010_2265 | Cupin domain-containing protein. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.416 |
SMG41988.1 | SMG41979.1 | SAMN06296010_2683 | SAMN06296010_2681 | Hypothetical protein. | Hypothetical protein. | 0.453 |
SMG41988.1 | SMG41985.1 | SAMN06296010_2683 | SAMN06296010_2682 | Hypothetical protein. | Cupin domain-containing protein. | 0.623 |
SMG42445.1 | SMG10157.1 | SAMN06296010_2729 | SAMN06296010_0206 | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.410 |
SMG42445.1 | SMG41985.1 | SAMN06296010_2729 | SAMN06296010_2682 | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | Cupin domain-containing protein. | 0.444 |
SMG42445.1 | SMG44354.1 | SAMN06296010_2729 | SAMN06296010_2855 | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | Mannose-6-phosphate isomerase, cupin superfamily. | 0.588 |
SMG44354.1 | SMG10157.1 | SAMN06296010_2855 | SAMN06296010_0206 | Mannose-6-phosphate isomerase, cupin superfamily. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.589 |
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