STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG44364.1Hypothetical protein. (207 aa)    
Predicted Functional Partners:
SMG37950.1
Tryptophan-associated transmembrane protein (Trp_oprn_chp).
  
     0.662
SMG44369.1
Protein of unknown function.
       0.561
SMG44373.1
Acetyl esterase/lipase.
       0.561
SMG44360.1
Putative copper resistance protein D.
       0.539
SMG38656.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.524
SMG31815.1
Hypothetical protein.
  
     0.495
SMG44378.1
Hypothetical protein.
       0.433
SMG11729.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
  
     0.420
SMG31287.1
Cytochrome oxidase assembly protein ShyY1.
  
     0.414
SMG48535.1
Hypothetical protein.
  
     0.412
Your Current Organism:
Agreia pratensis
NCBI taxonomy Id: 150121
Other names: A. pratensis, Agreia pratensis (Behrendt et al. 2002) Schumann et al. 2003, DSM 14246, JCM 12145, LMG 21000, LMG:21000, NBRC 103054, Subtercola pratensis, Subtercola pratensis Behrendt et al. 2002, Subtercola sp. P229/10, VKM Ac-2510, strain P 229/10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.