STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG47508.1Uncharacterized membrane protein. (1274 aa)    
Predicted Functional Partners:
SMG30133.1
Hypothetical protein.
  
     0.678
SMG15482.1
WD40-like Beta Propeller Repeat.
   
 
 0.629
SMG13412.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
  
     0.569
SMG48089.1
Uncharacterized conserved protein YafD, endonuclease/exonuclease/phosphatase (EEP) superfamily.
  
     0.559
SMG44420.1
Hypothetical protein.
   
 
 0.513
SMG36496.1
Hypothetical protein.
  
     0.486
SMG12266.1
O-antigen ligase.
  
     0.474
SMG45669.1
Uncharacterized membrane protein HdeD, DUF308 family.
  
     0.461
SMG31998.1
Helicase conserved C-terminal domain-containing protein.
  
     0.437
SMG27645.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Agreia pratensis
NCBI taxonomy Id: 150121
Other names: A. pratensis, Agreia pratensis (Behrendt et al. 2002) Schumann et al. 2003, DSM 14246, JCM 12145, LMG 21000, LMG:21000, NBRC 103054, Subtercola pratensis, Subtercola pratensis Behrendt et al. 2002, Subtercola sp. P229/10, VKM Ac-2510, strain P 229/10
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.