STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG47988.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (390 aa)    
Predicted Functional Partners:
SMG26378.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
    
 0.870
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
    
  0.785
SMG20773.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
     0.775
SMG37060.1
Polyphosphate glucokinase.
  
  
  0.709
SMG47993.1
Major Facilitator Superfamily protein.
  
    0.679
SMG47979.1
BadF-type ATPase.
       0.642
SMG47998.1
Beta-galactosidase.
    
  0.630
SMG49509.1
Glucokinase.
 
  
 
0.627
SMG48002.1
Hypothetical protein.
       0.531
SMG31509.1
N-acetylglucosamine 6-phosphate deacetylase.
 
  
  0.520
Your Current Organism:
Agreia pratensis
NCBI taxonomy Id: 150121
Other names: A. pratensis, Agreia pratensis (Behrendt et al. 2002) Schumann et al. 2003, DSM 14246, JCM 12145, LMG 21000, LMG:21000, NBRC 103054, Subtercola pratensis, Subtercola pratensis Behrendt et al. 2002, Subtercola sp. P229/10, VKM Ac-2510, strain P 229/10
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