STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG49979.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (316 aa)    
Predicted Functional Partners:
SMG49983.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.995
SMG49975.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.991
SMG20623.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.947
SMG25508.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.940
SMG25294.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.905
SMG47944.1
Alpha-1,4-digalacturonate transport system permease protein.
 
  0.896
SMG19273.1
Sn-glycerol 3-phosphate transport system permease protein.
 
  0.893
SMG17787.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.888
SMG31861.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.863
SMG45102.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.856
Your Current Organism:
Agreia pratensis
NCBI taxonomy Id: 150121
Other names: A. pratensis, Agreia pratensis (Behrendt et al. 2002) Schumann et al. 2003, DSM 14246, JCM 12145, LMG 21000, LMG:21000, NBRC 103054, Subtercola pratensis, Subtercola pratensis Behrendt et al. 2002, Subtercola sp. P229/10, VKM Ac-2510, strain P 229/10
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