STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQX78771.1beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa)    
Predicted Functional Partners:
AQX81894.1
N-acyl-D-amino-acid deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.970
AQX78772.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
  0.840
AQX81076.1
PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.695
AQX78964.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.690
AQX81932.1
Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.681
AQX81389.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.665
AQX81193.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.649
cutC
Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.640
AQX79583.1
beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.599
AQX81147.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.576
Your Current Organism:
Plantibacter flavus
NCBI taxonomy Id: 150123
Other names: Clavibacter sp. P297/02, DSM 14012, JCM 12144, LMG 19919, LMG:19919, NBRC 103081, P. flavus, Plantibacter flavus Behrendt et al. 2002, VKM Ac-2504, strain P 297/02
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