STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQX81259.1Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)    
Predicted Functional Partners:
AQX81258.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.958
AQX82296.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.856
AQX81257.1
AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.832
AQX82276.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.823
AQX82282.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.766
AQX81127.1
PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.724
xylB
Xylulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.572
AQX80124.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
  
 
 0.522
AQX78761.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.521
AQX81260.1
Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.521
Your Current Organism:
Plantibacter flavus
NCBI taxonomy Id: 150123
Other names: Clavibacter sp. P297/02, DSM 14012, JCM 12144, LMG 19919, LMG:19919, NBRC 103081, P. flavus, Plantibacter flavus Behrendt et al. 2002, VKM Ac-2504, strain P 297/02
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