STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EW15_0647Ribulose bisphosphate carboxylase small chain; Alternative locus ID: PMIT0801_0648. (113 aa)    
Predicted Functional Partners:
cbbL
Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.
 
 0.999
EW15_0876
Phosphoribulokinase; Alternative locus ID: PMIT0801_0878.
 
 
 0.970
pgk
Phosphoglycerate kinase; Alternative locus ID: PMIT0801_0284; Belongs to the phosphoglycerate kinase family.
    
 0.913
EW15_0416
Haloacid dehalogenase/epoxide hydrolase family; Alternative locus ID: PMIT0801_0416.
     
 0.907
EW15_0933
D-glycerate 3-kinase; Alternative locus ID: PMIT0801_0936; plant type.
     
  0.900
EW15_0648
Carboxysome shell protein CsoS2; Alternative locus ID: PMIT0801_0649.
 
   
 0.895
EW15_0649
Carboxysome shell protein CsoS3; Alternative locus ID: PMIT0801_0650.
 
   
 0.868
EW15_0650
Putative carboxysome peptide A; Alternative locus ID: PMIT0801_0651.
 
 
 
 0.846
EW15_0651
Putative carboxysome peptide B; Alternative locus ID: PMIT0801_0652.
 
 
 
 0.818
EW15_0653
Putative pterin-4 alpha-carbinolamine dehydratase-like protein; Alternative locus ID: PMIT0801_0654.
 
     0.728
Your Current Organism:
Prochlorococcus sp. MIT0801
NCBI taxonomy Id: 1501269
Other names: P. sp. MIT 0801, Prochlorococcus sp. MIT 0801
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.