STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ85089.1Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. (522 aa)    
Predicted Functional Partners:
SDZ85064.1
dCMP deaminase.
       0.832
SDZ85038.1
HupE / UreJ protein.
       0.820
SEA60484.1
Aspartate kinase.
    
  0.743
SDZ85016.1
Hypothetical protein.
       0.497
SEA69343.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
  0.487
SDZ90263.1
Gliding motility-associated C-terminal domain-containing protein.
   
  0.476
SDZ96617.1
Concanavalin A-like lectin/glucanases superfamily protein.
   
  0.476
SDZ96678.1
Por secretion system C-terminal sorting domain-containing protein.
   
  0.476
SEA02041.1
Gliding motility-associated C-terminal domain-containing protein.
   
  0.476
SEA02650.1
Gliding motility-associated C-terminal domain-containing protein.
   
  0.476
Your Current Organism:
Flavobacterium gillisiae
NCBI taxonomy Id: 150146
Other names: ACAM 601, DSM 22376, F. gillisiae, Flavobacterium gillisiae McCammon and Bowman 2000, Flavobacterium sp. IC001, strain IC001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.