STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ94856.1Transglutaminase-like enzyme, putative cysteine protease. (289 aa)    
Predicted Functional Partners:
SDZ94830.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
  
 0.964
SEA51727.1
Uncharacterized conserved protein, Alpha-E superfamily.
    0.833
SEA21206.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
    0.798
SEA51752.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
    0.798
SEA21179.1
Uncharacterized conserved protein, Alpha-E superfamily.
 
    0.793
SDZ94790.1
Transglutaminase-like enzyme, putative cysteine protease.
 
    
0.689
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.680
SDZ94760.1
Uncharacterized conserved protein, DUF2126 family.
 
    
0.548
SDZ94880.1
Restriction endonuclease.
       0.505
SDZ94932.1
Metallo-beta-lactamase family protein.
       0.425
Your Current Organism:
Flavobacterium gillisiae
NCBI taxonomy Id: 150146
Other names: ACAM 601, DSM 22376, F. gillisiae, Flavobacterium gillisiae McCammon and Bowman 2000, Flavobacterium sp. IC001, strain IC001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.