STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ95124.1Tetratricopeptide repeat-containing protein. (283 aa)    
Predicted Functional Partners:
SDZ95151.1
Lipopolysaccharide-assembly.
 
    0.883
SDZ95096.1
Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.861
SEA18785.1
Sporulation related domain-containing protein.
 
     0.759
SEA43991.1
Hypothetical protein.
  
     0.744
SEA31683.1
Family of unknown function.
  
     0.733
SEA72204.1
Hypothetical protein.
  
     0.722
SEA89892.1
Protein of unknown function.
  
     0.722
SDZ93641.1
Hypothetical protein.
  
     0.717
SEA61175.1
Surface antigen.
  
     0.708
SEA21102.1
Protein of unknown function.
  
     0.706
Your Current Organism:
Flavobacterium gillisiae
NCBI taxonomy Id: 150146
Other names: ACAM 601, DSM 22376, F. gillisiae, Flavobacterium gillisiae McCammon and Bowman 2000, Flavobacterium sp. IC001, strain IC001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.