STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA13019.1Gliding motility-associated C-terminal domain-containing protein. (1101 aa)    
Predicted Functional Partners:
SEA12958.1
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.823
SEA75095.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.477
SEA13078.1
Hypothetical protein.
       0.475
SEA28080.1
OmpA family protein.
  
    0.470
SEA75033.1
Glycosyl hydrolases family 16.
     0.470
SEB06874.1
HYR domain-containing protein.
  
     0.465
SEA75074.1
Starch-binding associating with outer membrane.
  
     0.424
SEA75137.1
Y_Y_Y domain-containing protein.
  
    0.406
Your Current Organism:
Flavobacterium gillisiae
NCBI taxonomy Id: 150146
Other names: ACAM 601, DSM 22376, F. gillisiae, Flavobacterium gillisiae McCammon and Bowman 2000, Flavobacterium sp. IC001, strain IC001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.