STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA42578.1Nitroreductase. (210 aa)    
Predicted Functional Partners:
SEA42545.1
Transcriptional regulator, MarR family.
  
 
  0.859
SEA42607.1
Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family.
       0.687
SEA04192.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
 
 0.517
SEA52428.1
Nitroreductase / dihydropteridine reductase.
  
  
 
0.482
SEA40760.1
O-succinylbenzoic acid--CoA ligase.
   
   0.472
SEA68535.1
fatty-acyl-CoA synthase.
   
   0.472
SEA50645.1
Luciferase family oxidoreductase, group 1.
  
 
 0.471
SDZ97927.1
Adenylyltransferase and sulfurtransferase.
    
  0.463
SDZ86788.1
Adenylyltransferase and sulfurtransferase.
    
  0.463
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
 
 0.460
Your Current Organism:
Flavobacterium gillisiae
NCBI taxonomy Id: 150146
Other names: ACAM 601, DSM 22376, F. gillisiae, Flavobacterium gillisiae McCammon and Bowman 2000, Flavobacterium sp. IC001, strain IC001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.