STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA40006.1Imidazolonepropionase. (997 aa)    
Predicted Functional Partners:
SEA40045.1
Imidazolonepropionase.
    
0.977
SEA56119.1
N-formylglutamate amidohydrolase.
  
 
 0.713
SEA32340.1
Histidine ammonia-lyase.
  
  
 0.706
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
 
 0.679
SDZ96606.1
Hypothetical protein.
  
 
 0.679
SEA96344.1
Hypothetical protein.
  
 
 0.679
SEA68673.1
Imidazolonepropionase.
  
     0.520
SDZ95441.1
Arginase family enzyme; Belongs to the arginase family.
  
 
 0.508
SEA30948.1
Formiminoglutamase; Belongs to the arginase family.
  
 
 0.508
SEA99899.1
Arginase; Belongs to the arginase family.
  
 
 0.508
Your Current Organism:
Flavobacterium gillisiae
NCBI taxonomy Id: 150146
Other names: ACAM 601, DSM 22376, F. gillisiae, Flavobacterium gillisiae McCammon and Bowman 2000, Flavobacterium sp. IC001, strain IC001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.