STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA74509.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
SEA74528.1
Hypothetical protein.
 
     0.790
SEA04285.1
Protein involved in gliding motility GldI.
  
     0.662
SEA85503.1
Hypothetical protein.
  
     0.590
SEA67500.1
Predicted phospholipase, patatin/cPLA2 family.
  
     0.578
SEA21102.1
Protein of unknown function.
  
     0.576
SEA55830.1
Patatin-like phospholipase.
  
     0.575
SEA89679.1
Hypothetical protein.
  
     0.536
SEA91025.1
Phage shock protein C (PspC) family protein.
  
     0.504
SDZ95124.1
Tetratricopeptide repeat-containing protein.
  
     0.501
SEA27238.1
Hypothetical protein.
  
     0.481
Your Current Organism:
Flavobacterium gillisiae
NCBI taxonomy Id: 150146
Other names: ACAM 601, DSM 22376, F. gillisiae, Flavobacterium gillisiae McCammon and Bowman 2000, Flavobacterium sp. IC001, strain IC001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.