STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA86937.1Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold. (804 aa)    
Predicted Functional Partners:
SEA26346.1
Capsular exopolysaccharide family.
  
 0.990
SEA86805.1
Protein involved in gliding motility EpsB.
  
 0.990
SEA86957.1
Chain length determinant protein.
 
 0.958
SEA89468.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.914
SEA88842.1
Lipopolysaccharide transport system permease protein.
  
 
 0.807
SEA88897.1
Lipopolysaccharide transport system ATP-binding protein.
  
 
 0.807
SEA86977.1
UDP-glucose 4-epimerase.
  
 
 0.726
SEA11997.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.601
SEA87438.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
 
 0.545
SEA20209.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
 
 0.536
Your Current Organism:
Flavobacterium gillisiae
NCBI taxonomy Id: 150146
Other names: ACAM 601, DSM 22376, F. gillisiae, Flavobacterium gillisiae McCammon and Bowman 2000, Flavobacterium sp. IC001, strain IC001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.