STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA89044.1Glycosyltransferase involved in cell wall bisynthesis. (381 aa)    
Predicted Functional Partners:
SEA88989.1
Glycosyltransferase, GT2 family.
 
  
  0.832
SEA89133.1
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase.
 
  
  0.814
SEA89097.1
N-acylneuraminate cytidylyltransferase.
 
  
 0.812
SEA89116.1
N-acetylneuraminate synthase.
 
    0.802
SEA89274.1
Glycosyltransferase, GT2 family.
 
    0.784
SEA89358.1
Glycosyltransferase, GT2 family.
 
    0.779
SEA89255.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.765
SEA89396.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.758
SDZ96678.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.724
SEA91110.1
Hypothetical protein.
  
     0.702
Your Current Organism:
Flavobacterium gillisiae
NCBI taxonomy Id: 150146
Other names: ACAM 601, DSM 22376, F. gillisiae, Flavobacterium gillisiae McCammon and Bowman 2000, Flavobacterium sp. IC001, strain IC001
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