STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA98113.1Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. (295 aa)    
Predicted Functional Partners:
SEA98125.1
Serine O-acetyltransferase.
 
 0.997
SEA60484.1
Aspartate kinase.
  
 
 0.868
SEA60168.1
Sulfite reductase (ferredoxin).
 
 
 0.854
SEA25989.1
Serine acetyltransferase.
  
 0.830
SEA98100.1
Acetyltransferase (GNAT) family protein.
  
 
  0.795
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.762
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 0.756
SDZ97927.1
Adenylyltransferase and sulfurtransferase.
  
 0.748
SDZ86788.1
Adenylyltransferase and sulfurtransferase.
  
 0.748
SEA83064.1
Cystathionine gamma-lyase.
 
 0.742
Your Current Organism:
Flavobacterium gillisiae
NCBI taxonomy Id: 150146
Other names: ACAM 601, DSM 22376, F. gillisiae, Flavobacterium gillisiae McCammon and Bowman 2000, Flavobacterium sp. IC001, strain IC001
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