Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ87261.1 | SEB02469.1 | SAMN05443667_101106 | SAMN05443667_115129 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.426 |
SDZ87440.1 | SEA90046.1 | SAMN05443667_101115 | SAMN05443667_11173 | Hypothetical protein. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.472 |
SDZ87440.1 | SEB02469.1 | SAMN05443667_101115 | SAMN05443667_115129 | Hypothetical protein. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.580 |
SDZ87440.1 | kmo | SAMN05443667_101115 | SAMN05443667_10617 | Hypothetical protein. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. | 0.472 |
SEA21234.1 | SEB02469.1 | SAMN05443667_102343 | SAMN05443667_115129 | Polysaccharide deacetylase. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.426 |
SEA52009.1 | SEB02469.1 | SAMN05443667_10591 | SAMN05443667_115129 | Molybdenum cofactor sulfurylase. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.515 |
SEA85092.1 | SEB02469.1 | SAMN05443667_11011 | SAMN05443667_115129 | Peptidase family C25. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.550 |
SEA90046.1 | SDZ87440.1 | SAMN05443667_11173 | SAMN05443667_101115 | 2-polyprenyl-6-methoxyphenol hydroxylase. | Hypothetical protein. | 0.472 |
SEA90046.1 | SEB02469.1 | SAMN05443667_11173 | SAMN05443667_115129 | 2-polyprenyl-6-methoxyphenol hydroxylase. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.509 |
SEB02458.1 | SEB02469.1 | SAMN05443667_115128 | SAMN05443667_115129 | DoxX protein. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.541 |
SEB02458.1 | SEB02477.1 | SAMN05443667_115128 | SAMN05443667_115130 | DoxX protein. | Uncharacterized conserved protein GlcG, DUF336 family. | 0.541 |
SEB02458.1 | SEB02488.1 | SAMN05443667_115128 | SAMN05443667_115131 | DoxX protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.495 |
SEB02469.1 | SDZ87261.1 | SAMN05443667_115129 | SAMN05443667_101106 | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | 0.426 |
SEB02469.1 | SDZ87440.1 | SAMN05443667_115129 | SAMN05443667_101115 | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | Hypothetical protein. | 0.580 |
SEB02469.1 | SEA21234.1 | SAMN05443667_115129 | SAMN05443667_102343 | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | Polysaccharide deacetylase. | 0.426 |
SEB02469.1 | SEA52009.1 | SAMN05443667_115129 | SAMN05443667_10591 | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | Molybdenum cofactor sulfurylase. | 0.515 |
SEB02469.1 | SEA85092.1 | SAMN05443667_115129 | SAMN05443667_11011 | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | Peptidase family C25. | 0.550 |
SEB02469.1 | SEA90046.1 | SAMN05443667_115129 | SAMN05443667_11173 | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.509 |
SEB02469.1 | SEB02458.1 | SAMN05443667_115129 | SAMN05443667_115128 | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | DoxX protein. | 0.541 |
SEB02469.1 | SEB02477.1 | SAMN05443667_115129 | SAMN05443667_115130 | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | Uncharacterized conserved protein GlcG, DUF336 family. | 0.879 |
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