STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB04016.1Protein of unknown function. (141 aa)    
Predicted Functional Partners:
SEB04025.1
Cellulose biosynthesis protein BcsQ.
 
     0.952
SEB04003.1
Hypothetical protein.
       0.800
SEB03798.1
Protein of unknown function.
 
     0.782
SEB03775.1
Protein of unknown function.
 
     0.780
SEB04036.1
Hypothetical protein.
 
     0.780
SEB03809.1
Protein of unknown function.
 
     0.777
SEB03735.1
Bacteroides conjugative transposon TraM protein.
 
     0.774
SEB04213.1
Protein of unknown function.
  
     0.774
SEB04227.1
Helix-turn-helix domain-containing protein.
  
     0.774
SEB03756.1
Bacteroides conjugative transposon TraK protein.
 
     0.773
Your Current Organism:
Flavobacterium gillisiae
NCBI taxonomy Id: 150146
Other names: ACAM 601, DSM 22376, F. gillisiae, Flavobacterium gillisiae McCammon and Bowman 2000, Flavobacterium sp. IC001, strain IC001
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.