Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEA82893.1 | SEB05969.1 | SAMN05443667_109151 | SAMN05443667_11825 | L-histidine carboxy-lyase (histamine-forming). | Hypothetical protein. | 0.492 |
SEA82893.1 | glmS | SAMN05443667_109151 | SAMN05443667_102138 | L-histidine carboxy-lyase (histamine-forming). | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.456 |
SEA82893.1 | panD | SAMN05443667_109151 | SAMN05443667_102142 | L-histidine carboxy-lyase (histamine-forming). | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.838 |
SEB05948.1 | SEB05960.1 | SAMN05443667_11823 | SAMN05443667_11824 | CubicO group peptidase, beta-lactamase class C family. | Adenylate kinase. | 0.601 |
SEB05948.1 | SEB05969.1 | SAMN05443667_11823 | SAMN05443667_11825 | CubicO group peptidase, beta-lactamase class C family. | Hypothetical protein. | 0.601 |
SEB05948.1 | SEB05979.1 | SAMN05443667_11823 | SAMN05443667_11826 | CubicO group peptidase, beta-lactamase class C family. | Hypothetical protein. | 0.601 |
SEB05948.1 | SEB05990.1 | SAMN05443667_11823 | SAMN05443667_11827 | CubicO group peptidase, beta-lactamase class C family. | Predicted transcriptional regulator, contains an HTH and PUA-like domains. | 0.551 |
SEB05960.1 | SEB05948.1 | SAMN05443667_11824 | SAMN05443667_11823 | Adenylate kinase. | CubicO group peptidase, beta-lactamase class C family. | 0.601 |
SEB05960.1 | SEB05969.1 | SAMN05443667_11824 | SAMN05443667_11825 | Adenylate kinase. | Hypothetical protein. | 0.794 |
SEB05960.1 | SEB05979.1 | SAMN05443667_11824 | SAMN05443667_11826 | Adenylate kinase. | Hypothetical protein. | 0.781 |
SEB05960.1 | SEB05990.1 | SAMN05443667_11824 | SAMN05443667_11827 | Adenylate kinase. | Predicted transcriptional regulator, contains an HTH and PUA-like domains. | 0.732 |
SEB05969.1 | SEA82893.1 | SAMN05443667_11825 | SAMN05443667_109151 | Hypothetical protein. | L-histidine carboxy-lyase (histamine-forming). | 0.492 |
SEB05969.1 | SEB05948.1 | SAMN05443667_11825 | SAMN05443667_11823 | Hypothetical protein. | CubicO group peptidase, beta-lactamase class C family. | 0.601 |
SEB05969.1 | SEB05960.1 | SAMN05443667_11825 | SAMN05443667_11824 | Hypothetical protein. | Adenylate kinase. | 0.794 |
SEB05969.1 | SEB05979.1 | SAMN05443667_11825 | SAMN05443667_11826 | Hypothetical protein. | Hypothetical protein. | 0.793 |
SEB05969.1 | SEB05990.1 | SAMN05443667_11825 | SAMN05443667_11827 | Hypothetical protein. | Predicted transcriptional regulator, contains an HTH and PUA-like domains. | 0.936 |
SEB05969.1 | SEB06612.1 | SAMN05443667_11825 | SAMN05443667_11926 | Hypothetical protein. | Putative virulence factor. | 0.544 |
SEB05969.1 | SEB06912.1 | SAMN05443667_11825 | SAMN05443667_1204 | Hypothetical protein. | Gliding motility-associated C-terminal domain-containing protein. | 0.500 |
SEB05969.1 | glmS | SAMN05443667_11825 | SAMN05443667_102138 | Hypothetical protein. | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.708 |
SEB05969.1 | glpK | SAMN05443667_11825 | SAMN05443667_101410 | Hypothetical protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.620 |
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