Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ93509.1 | SEB05903.1 | SAMN05443667_101350 | SAMN05443667_11818 | Protein involved in gliding motility GldC. | Protein of unknown function. | 0.760 |
SDZ93509.1 | SEB06064.1 | SAMN05443667_101350 | SAMN05443667_11835 | Protein involved in gliding motility GldC. | Hypothetical protein. | 0.402 |
SEA19607.1 | SEB06064.1 | SAMN05443667_102287 | SAMN05443667_11835 | Threonine/homoserine/homoserine lactone efflux protein. | Hypothetical protein. | 0.492 |
SEA40276.1 | SEA98976.1 | SAMN05443667_10475 | SAMN05443667_11467 | Dihydrolipoamide dehydrogenase. | Dihydrolipoamide dehydrogenase. | 0.912 |
SEA40276.1 | SEB06064.1 | SAMN05443667_10475 | SAMN05443667_11835 | Dihydrolipoamide dehydrogenase. | Hypothetical protein. | 0.401 |
SEA66471.1 | SEB06064.1 | SAMN05443667_1073 | SAMN05443667_11835 | Peptidase family M28. | Hypothetical protein. | 0.446 |
SEA98976.1 | SEA40276.1 | SAMN05443667_11467 | SAMN05443667_10475 | Dihydrolipoamide dehydrogenase. | Dihydrolipoamide dehydrogenase. | 0.912 |
SEA98976.1 | SEB06064.1 | SAMN05443667_11467 | SAMN05443667_11835 | Dihydrolipoamide dehydrogenase. | Hypothetical protein. | 0.401 |
SEB05903.1 | SDZ93509.1 | SAMN05443667_11818 | SAMN05443667_101350 | Protein of unknown function. | Protein involved in gliding motility GldC. | 0.760 |
SEB05903.1 | SEB06064.1 | SAMN05443667_11818 | SAMN05443667_11835 | Protein of unknown function. | Hypothetical protein. | 0.650 |
SEB06045.1 | SEB06054.1 | SAMN05443667_11833 | SAMN05443667_11834 | Glyoxylase, beta-lactamase superfamily II. | Subtilase family protein; Belongs to the peptidase S8 family. | 0.716 |
SEB06045.1 | SEB06064.1 | SAMN05443667_11833 | SAMN05443667_11835 | Glyoxylase, beta-lactamase superfamily II. | Hypothetical protein. | 0.582 |
SEB06054.1 | SEB06045.1 | SAMN05443667_11834 | SAMN05443667_11833 | Subtilase family protein; Belongs to the peptidase S8 family. | Glyoxylase, beta-lactamase superfamily II. | 0.716 |
SEB06054.1 | SEB06064.1 | SAMN05443667_11834 | SAMN05443667_11835 | Subtilase family protein; Belongs to the peptidase S8 family. | Hypothetical protein. | 0.774 |
SEB06054.1 | SEB06072.1 | SAMN05443667_11834 | SAMN05443667_11836 | Subtilase family protein; Belongs to the peptidase S8 family. | Hypothetical protein. | 0.519 |
SEB06064.1 | SDZ93509.1 | SAMN05443667_11835 | SAMN05443667_101350 | Hypothetical protein. | Protein involved in gliding motility GldC. | 0.402 |
SEB06064.1 | SEA19607.1 | SAMN05443667_11835 | SAMN05443667_102287 | Hypothetical protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.492 |
SEB06064.1 | SEA40276.1 | SAMN05443667_11835 | SAMN05443667_10475 | Hypothetical protein. | Dihydrolipoamide dehydrogenase. | 0.401 |
SEB06064.1 | SEA66471.1 | SAMN05443667_11835 | SAMN05443667_1073 | Hypothetical protein. | Peptidase family M28. | 0.446 |
SEB06064.1 | SEA98976.1 | SAMN05443667_11835 | SAMN05443667_11467 | Hypothetical protein. | Dihydrolipoamide dehydrogenase. | 0.401 |
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