Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA38664.1 | SFA38671.1 | SAMN05216169_1001131 | SAMN05216169_1001132 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Hypothetical protein. | 0.559 |
SFA38671.1 | SFA38664.1 | SAMN05216169_1001132 | SAMN05216169_1001131 | Hypothetical protein. | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | 0.559 |
SFA38671.1 | SFA38681.1 | SAMN05216169_1001132 | SAMN05216169_1001133 | Hypothetical protein. | Hypothetical protein. | 0.524 |
SFA38671.1 | SFA42845.1 | SAMN05216169_1001132 | SAMN05216169_100672 | Hypothetical protein. | EAL domain-containing protein. | 0.667 |
SFA38671.1 | SFA52125.1 | SAMN05216169_1001132 | SAMN05216169_103118 | Hypothetical protein. | Two-component system, chemotaxis family, response regulator CheV. | 0.471 |
SFA38671.1 | SFA60070.1 | SAMN05216169_1001132 | SAMN05216169_11021 | Hypothetical protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.523 |
SFA38671.1 | cinA | SAMN05216169_1001132 | SAMN05216169_101152 | Hypothetical protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.502 |
SFA38671.1 | guaA | SAMN05216169_1001132 | SAMN05216169_10954 | Hypothetical protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.462 |
SFA38671.1 | guaB | SAMN05216169_1001132 | SAMN05216169_105517 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.646 |
SFA38671.1 | hisD | SAMN05216169_1001132 | SAMN05216169_101842 | Hypothetical protein. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.468 |
SFA38671.1 | scpA | SAMN05216169_1001132 | SAMN05216169_100493 | Hypothetical protein. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.718 |
SFA38681.1 | SFA38671.1 | SAMN05216169_1001133 | SAMN05216169_1001132 | Hypothetical protein. | Hypothetical protein. | 0.524 |
SFA42845.1 | SFA38671.1 | SAMN05216169_100672 | SAMN05216169_1001132 | EAL domain-containing protein. | Hypothetical protein. | 0.667 |
SFA42845.1 | SFA52125.1 | SAMN05216169_100672 | SAMN05216169_103118 | EAL domain-containing protein. | Two-component system, chemotaxis family, response regulator CheV. | 0.999 |
SFA42845.1 | SFA60070.1 | SAMN05216169_100672 | SAMN05216169_11021 | EAL domain-containing protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.999 |
SFA42845.1 | guaA | SAMN05216169_100672 | SAMN05216169_10954 | EAL domain-containing protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.677 |
SFA42845.1 | guaB | SAMN05216169_100672 | SAMN05216169_105517 | EAL domain-containing protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.810 |
SFA52125.1 | SFA38671.1 | SAMN05216169_103118 | SAMN05216169_1001132 | Two-component system, chemotaxis family, response regulator CheV. | Hypothetical protein. | 0.471 |
SFA52125.1 | SFA42845.1 | SAMN05216169_103118 | SAMN05216169_100672 | Two-component system, chemotaxis family, response regulator CheV. | EAL domain-containing protein. | 0.999 |
SFA52125.1 | SFA60070.1 | SAMN05216169_103118 | SAMN05216169_11021 | Two-component system, chemotaxis family, response regulator CheV. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.985 |
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