Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA39618.1 | SFA39692.1 | SAMN05216169_100272 | SAMN05216169_100282 | YwhD family protein. | Chlorite dismutase; May function as heme-dependent peroxidase. | 0.606 |
SFA39681.1 | SFA39692.1 | SAMN05216169_100281 | SAMN05216169_100282 | Undecaprenyl-diphosphatase. | Chlorite dismutase; May function as heme-dependent peroxidase. | 0.574 |
SFA39692.1 | SFA39618.1 | SAMN05216169_100282 | SAMN05216169_100272 | Chlorite dismutase; May function as heme-dependent peroxidase. | YwhD family protein. | 0.606 |
SFA39692.1 | SFA39681.1 | SAMN05216169_100282 | SAMN05216169_100281 | Chlorite dismutase; May function as heme-dependent peroxidase. | Undecaprenyl-diphosphatase. | 0.574 |
SFA39692.1 | SFA39700.1 | SAMN05216169_100282 | SAMN05216169_100283 | Chlorite dismutase; May function as heme-dependent peroxidase. | N-acetylmuramoyl-L-alanine amidase. | 0.551 |
SFA39692.1 | SFA39707.1 | SAMN05216169_100282 | SAMN05216169_100284 | Chlorite dismutase; May function as heme-dependent peroxidase. | Spore germination protein Q. | 0.532 |
SFA39692.1 | SFA47195.1 | SAMN05216169_100282 | SAMN05216169_101511 | Chlorite dismutase; May function as heme-dependent peroxidase. | Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.964 |
SFA39692.1 | SFA55475.1 | SAMN05216169_100282 | SAMN05216169_10474 | Chlorite dismutase; May function as heme-dependent peroxidase. | Radical SAM protein, BA_1875 family. | 0.940 |
SFA39692.1 | SFA56324.1 | SAMN05216169_100282 | SAMN05216169_10531 | Chlorite dismutase; May function as heme-dependent peroxidase. | Radical SAM protein, BA_1875 family. | 0.569 |
SFA39692.1 | ctaA | SAMN05216169_100282 | SAMN05216169_102916 | Chlorite dismutase; May function as heme-dependent peroxidase. | Cytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily. | 0.656 |
SFA39692.1 | ctaB | SAMN05216169_100282 | SAMN05216169_102917 | Chlorite dismutase; May function as heme-dependent peroxidase. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | 0.950 |
SFA39692.1 | hemH | SAMN05216169_100282 | SAMN05216169_101512 | Chlorite dismutase; May function as heme-dependent peroxidase. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.991 |
SFA39700.1 | SFA39692.1 | SAMN05216169_100283 | SAMN05216169_100282 | N-acetylmuramoyl-L-alanine amidase. | Chlorite dismutase; May function as heme-dependent peroxidase. | 0.551 |
SFA39700.1 | SFA39707.1 | SAMN05216169_100283 | SAMN05216169_100284 | N-acetylmuramoyl-L-alanine amidase. | Spore germination protein Q. | 0.986 |
SFA39707.1 | SFA39692.1 | SAMN05216169_100284 | SAMN05216169_100282 | Spore germination protein Q. | Chlorite dismutase; May function as heme-dependent peroxidase. | 0.532 |
SFA39707.1 | SFA39700.1 | SAMN05216169_100284 | SAMN05216169_100283 | Spore germination protein Q. | N-acetylmuramoyl-L-alanine amidase. | 0.986 |
SFA47195.1 | SFA39692.1 | SAMN05216169_101511 | SAMN05216169_100282 | Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Chlorite dismutase; May function as heme-dependent peroxidase. | 0.964 |
SFA47195.1 | ctaA | SAMN05216169_101511 | SAMN05216169_102916 | Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Cytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily. | 0.406 |
SFA47195.1 | hemH | SAMN05216169_101511 | SAMN05216169_101512 | Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.999 |
SFA55475.1 | SFA39692.1 | SAMN05216169_10474 | SAMN05216169_100282 | Radical SAM protein, BA_1875 family. | Chlorite dismutase; May function as heme-dependent peroxidase. | 0.940 |
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