STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA41936.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
SFA41929.1
Uncharacterized conserved protein YqhQ.
  
    0.845
SFA41923.1
Conserved membrane protein YqhR.
 
     0.751
SFA45809.1
Protein of unknown function; Belongs to the UPF0736 family.
  
     0.704
SFA45015.1
Hypothetical protein.
  
     0.671
SFA48836.1
Hypothetical protein.
  
     0.652
SFA43052.1
YugN-like family protein.
  
     0.641
SFA48105.1
Stage 0 sporulation protein B (sporulation initiation phosphotransferase).
  
     0.641
SFA38265.1
Flagellar FliJ protein.
  
     0.620
SFA48828.1
YtpI-like protein.
  
     0.608
SFA43250.1
Hypothetical protein.
  
     0.601
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.