STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA44929.1Germination protein M. (348 aa)    
Predicted Functional Partners:
SFA56469.1
Spore coat protein YsxE.
  
    0.805
SFA41864.1
Stage III sporulation protein AF.
  
    0.782
SFA56462.1
Stage VI sporulation protein D.
  
    0.782
SFA42206.1
Hypothetical protein.
  
     0.759
SFA43217.1
Spore coat protein YutH.
  
     0.759
SFA56617.1
YaaC-like Protein.
  
     0.758
SFA51328.1
Ca-activated chloride channel family protein.
  
    0.755
SFA51380.1
Protein of unknown function.
  
     0.752
SFA52969.1
Stage II sporulation protein P.
  
     0.752
SFA54705.1
Outer membrane lipoprotein-sorting protein.
  
     0.751
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.