STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA45842.1Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (350 aa)    
Predicted Functional Partners:
SFA45831.1
Oligopeptide transport system permease protein.
 0.999
SFA45836.1
Oligopeptide transport system permease protein.
 
 0.999
SFA45847.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.998
SFA45826.1
Oligopeptide transport system substrate-binding protein.
 
 0.997
SFA47467.1
Energy-coupling factor transport system ATP-binding protein.
 
 
0.913
SFA58081.1
ABC-2 type transport system ATP-binding protein.
   
 
0.904
SFA42227.1
Zinc transport system ATP-binding protein.
 
     
0.898
SFA39880.1
Amino acid ABC transporter membrane protein, PAAT family.
 
    
 0.731
SFA42571.1
ABC-2 type transport system ATP-binding protein.
 
     
0.642
SFA38302.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
 
 0.620
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
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