STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA47344.1Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. (114 aa)    
Predicted Functional Partners:
SFA45370.1
Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.
  
 
 
 0.863
SFA47353.1
Uncharacterized membrane protein YheB, UPF0754 family; Belongs to the UPF0754 family.
       0.639
SFA44842.1
Uncharacterized membrane protein, required for colicin V production.
  
     0.621
SFA47334.1
Hypothetical protein.
       0.617
SFA45214.1
Hypothetical protein.
  
    0.518
SFA47359.1
Hypothetical protein.
       0.498
SFA57570.1
Uncharacterized protein YkuJ.
   
    0.483
SFA47327.1
Oxygen-independent coproporphyrinogen-3 oxidase.
       0.481
SFA49512.1
Protein involved in sex pheromone biosynthesis.
  
     0.477
SFA49885.1
Two-component signal transduction system YycFG, regulatory protein YycH.
  
     0.473
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.