STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA48009.1Type IV pilus assembly protein PilA. (138 aa)    
Predicted Functional Partners:
SFA48027.1
General secretion pathway protein G.
  
 
0.956
SFA48019.1
Type IV pilus assembly protein PilM.
 
     0.925
SFA48013.1
Leader peptidase (prepilin peptidase) / N-methyltransferase.
 
  
 0.903
SFA42057.1
Competence-related pilin export protein ComGB.
  
  
 0.830
SFA42038.1
Competence protein ComGF.
 
  
 0.827
SFA42061.1
Competence-related pilin export protein ComGA.
  
  
 0.810
SFA52933.1
Competence protein ComEC.
   
  
 0.700
SFA48023.1
Type IV pilus assembly protein PilO.
       0.663
SFA51941.1
Competence protein ComFA.
   
  
 0.626
SFA52914.1
Competence protein ComEA.
   
  
 0.582
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
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