STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA50513.1Lactocepin; Belongs to the peptidase S8 family. (1429 aa)    
Predicted Functional Partners:
SFA50505.1
S-layer homology domain-containing protein.
 
 
  0.938
SFA50525.1
S-layer homology domain-containing protein.
 
 0.903
SFA50518.1
Conserved repeat domain-containing protein.
  
 0.867
SFA50494.1
Hypothetical protein.
  
 0.734
SFA52410.1
Hypothetical protein.
  
 
 0.683
SFA37857.1
Putative transposase.
  
 0.663
SFA38379.1
Hypothetical protein.
  
 0.663
SFA49535.1
Protein of unknown function.
  
 0.663
SFA49459.1
TIGR02677 family protein.
  
 0.663
SFA50553.1
S-layer homology domain-containing protein.
  
 0.663
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.