STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA50846.1Predicted arabinose efflux permease, MFS family. (390 aa)    
Predicted Functional Partners:
SFA50841.1
Hypothetical protein.
       0.596
SFA56757.1
Nucleotidyltransferase-like.
  
     0.537
SFA50850.1
YfkD-like protein.
       0.535
SFA57314.1
Inner membrane protein.
  
     0.492
SFA41216.1
Ferredoxin.
  
     0.490
SFA43205.1
Homoserine dehydrogenase.
   
  0.480
SFA45370.1
Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.
  
     0.475
SFA43181.1
Disulfide oxidoreductase YuzD.
  
     0.465
SFA59068.1
S-layer homology domain-containing protein.
   
 
 0.461
SFA40815.1
Uncharacterized membrane protein YpjA.
  
     0.458
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
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