STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA52715.1Stage V sporulation protein AB. (139 aa)    
Predicted Functional Partners:
SFA52709.1
Stage V sporulation protein AA.
 
  
 0.963
SFA52731.1
Stage V sporulation protein AC.
  
  
 0.862
spoIIAB
Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
 
   
 0.687
SFA52702.1
RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.669
SFA42175.1
MFS transporter, YQGE family, putative transporter.
  
     0.665
SFA51332.1
Stage II sporulation protein E.
  
     0.648
SFA52649.1
Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.
 
   
 0.643
SFA52690.1
Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family.
     
 0.637
SFA51548.1
Sporulation lipoprotein, YhcN/YlaJ family.
  
    0.619
SFA41114.1
Spore germination protein.
  
    0.572
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.