STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA53954.1methylmalonyl-CoA mutase metallochaperone MeaB. (366 aa)    
Predicted Functional Partners:
SFA53959.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
 
 0.997
SFA53963.1
Heterodimeric methylmalonyl-CoA mutase small subunit.
 
 
 0.997
SFA53934.1
methylmalonyl-CoA epimerase.
  
  0.984
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
 
0.959
SFA53925.1
propionyl-CoA carboxylase beta chain.
 
  
  0.684
SFA39996.1
Catechol 2,3-dioxygenase.
  
 
 0.594
SFA53949.1
Uncharacterized membrane protein YgaE, UPF0421/DUF939 family.
       0.586
SFA53967.1
Hypothetical protein.
       0.515
SFA43396.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
  0.506
SFA53946.1
L,D-transpeptidase catalytic domain.
       0.476
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
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