STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA54544.140-residue YVTN family beta-propeller repeat-containing protein. (323 aa)    
Predicted Functional Partners:
SFA48463.1
Cytochrome c551.
  
 0.954
SFA54049.1
Cytochrome c550.
  
 0.954
SFA54554.1
HAMP domain-containing protein.
       0.800
SFA42494.1
Glutamate synthase (NADPH) large subunit.
    
  0.789
SFA56799.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.789
SFA54550.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
       0.773
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.747
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
 
 0.682
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.668
SFA38256.1
Flagellar motility protein MotE, a chaperone for MotC folding.
   
 
 0.662
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
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