Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA40854.1 | SFA54684.1 | SAMN05216169_100411 | SAMN05216169_104314 | Tetratricopeptide repeat-containing protein. | SprT-like protein; Belongs to the SprT family. | 0.411 |
SFA40854.1 | SFA54690.1 | SAMN05216169_100411 | SAMN05216169_104315 | Tetratricopeptide repeat-containing protein. | Uncharacterized protein. | 0.833 |
SFA40854.1 | SFA56102.1 | SAMN05216169_100411 | SAMN05216169_10517 | Tetratricopeptide repeat-containing protein. | Tetratricopeptide repeat-containing protein. | 0.611 |
SFA40854.1 | SFA56898.1 | SAMN05216169_100411 | SAMN05216169_105812 | Tetratricopeptide repeat-containing protein. | Superfamily II DNA or RNA helicase, SNF2 family. | 0.754 |
SFA40854.1 | rpoA | SAMN05216169_100411 | SAMN05216169_101363 | Tetratricopeptide repeat-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.946 |
SFA40854.1 | rpoB | SAMN05216169_100411 | SAMN05216169_101327 | Tetratricopeptide repeat-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.937 |
SFA40854.1 | rpoZ | SAMN05216169_100411 | SAMN05216169_1001127 | Tetratricopeptide repeat-containing protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.927 |
SFA54684.1 | SFA40854.1 | SAMN05216169_104314 | SAMN05216169_100411 | SprT-like protein; Belongs to the SprT family. | Tetratricopeptide repeat-containing protein. | 0.411 |
SFA54684.1 | SFA54690.1 | SAMN05216169_104314 | SAMN05216169_104315 | SprT-like protein; Belongs to the SprT family. | Uncharacterized protein. | 0.580 |
SFA54684.1 | SFA54694.1 | SAMN05216169_104314 | SAMN05216169_104316 | SprT-like protein; Belongs to the SprT family. | mRNA interferase MazF; Toxic component of a type II toxin-antitoxin (TA) system. | 0.438 |
SFA54690.1 | SFA40854.1 | SAMN05216169_104315 | SAMN05216169_100411 | Uncharacterized protein. | Tetratricopeptide repeat-containing protein. | 0.833 |
SFA54690.1 | SFA54684.1 | SAMN05216169_104315 | SAMN05216169_104314 | Uncharacterized protein. | SprT-like protein; Belongs to the SprT family. | 0.580 |
SFA54690.1 | SFA54694.1 | SAMN05216169_104315 | SAMN05216169_104316 | Uncharacterized protein. | mRNA interferase MazF; Toxic component of a type II toxin-antitoxin (TA) system. | 0.647 |
SFA54690.1 | SFA54699.1 | SAMN05216169_104315 | SAMN05216169_104317 | Uncharacterized protein. | CopG family transcriptional regulator / antitoxin EndoAI. | 0.647 |
SFA54690.1 | SFA54702.1 | SAMN05216169_104315 | SAMN05216169_104318 | Uncharacterized protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.463 |
SFA54690.1 | SFA56102.1 | SAMN05216169_104315 | SAMN05216169_10517 | Uncharacterized protein. | Tetratricopeptide repeat-containing protein. | 0.858 |
SFA54690.1 | SFA56898.1 | SAMN05216169_104315 | SAMN05216169_105812 | Uncharacterized protein. | Superfamily II DNA or RNA helicase, SNF2 family. | 0.691 |
SFA54690.1 | rpoA | SAMN05216169_104315 | SAMN05216169_101363 | Uncharacterized protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.923 |
SFA54690.1 | rpoB | SAMN05216169_104315 | SAMN05216169_101327 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.918 |
SFA54690.1 | rpoZ | SAMN05216169_104315 | SAMN05216169_1001127 | Uncharacterized protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.906 |
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