STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA55488.1Hypothetical protein. (287 aa)    
Predicted Functional Partners:
SFA52067.1
Hypothetical protein.
 
  
  0.817
SFA52074.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
  
  0.777
SFA55492.1
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
    
  0.691
SFA52057.1
Signal transduction histidine kinase.
  
  
 0.614
SFA55484.1
Polysaccharide deacetylase family sporulation protein PdaB.
  
    0.564
SFA44929.1
Germination protein M.
    
  0.503
SFA59546.1
PrcB C-terminal.
    
  0.503
SFA50318.1
Superfamily II DNA or RNA helicase.
 
    0.488
SFA50553.1
S-layer homology domain-containing protein.
  
  
  0.446
SFA47744.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
  
  0.416
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.