STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA56775.1ABC-2 type transport system permease protein. (261 aa)    
Predicted Functional Partners:
SFA56787.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.985
SFA56780.1
ABC-2 type transport system permease protein.
 
 
 0.984
SFA56770.1
Potassium channel LctB.
  
    0.699
SFA56766.1
Peroxiredoxin Q/BCP.
       0.658
hemL-2
Glutamate-1-semialdehyde 2,1-aminomutase.
       0.565
SFA43023.1
Sporulation-control protein.
  
     0.490
SFA49089.1
Sporulation-control protein.
 
     0.467
SFA56799.1
Glutamate synthase (NADPH/NADH) large chain.
       0.454
SFA57141.1
Protein of unknown function.
  
     0.444
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.