STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA57759.1Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (367 aa)    
Predicted Functional Partners:
SFA42494.1
Glutamate synthase (NADPH) large subunit.
  
 0.999
SFA56799.1
Glutamate synthase (NADPH/NADH) large chain.
  
 0.999
SFA57750.1
Branched-chain alpha-keto acid dehydrogenase E1 component.
  
 
 0.985
SFA57746.1
Branched-chain alpha-keto acid dehydrogenase E1 component.
  
 
 0.983
SFA57763.1
Phosphate butyryltransferase.
  
 
 0.971
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
   
 0.950
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
   
 
 0.947
SFA57743.1
2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase).
  
 
 0.944
buk
Butyrate kinase; Belongs to the acetokinase family.
 
  
 0.944
SFA57751.1
Dihydrolipoamide dehydrogenase.
  
 
 0.772
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
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