STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FF80_03023Dipeptide-binding ABC transporter, periplasmic substrate-binding component. (531 aa)    
Predicted Functional Partners:
FF80_03024
Dipeptide transport system permease protein DppB.
 
  0.994
FF80_03027
Oligopeptide transport ATP-binding protein OppF.
 
 
  0.992
FF80_03026
Oligopeptide transport ATP-binding protein OppD.
 
 
  0.984
FF80_03025
Dipeptide transport system permease protein DppC.
  0.972
FF80_01123
Dipeptide transport system permease protein DppB.
  
  0.811
FF80_02296
(GlcNAc)2 ABC transporter, permease component 1.
  
  0.703
FF80_00510
Dipeptide transport system permease protein DppB.
  
  0.695
FF80_02359
Dipeptide transport system permease protein DppB.
  
  0.645
FF80_02415
Dipeptide transport system permease protein DppB.
  
  0.638
FF80_00636
Oligopeptide transport ATP-binding protein OppD.
  
  0.549
Your Current Organism:
Devosia sp. LC5
NCBI taxonomy Id: 1502724
Other names: D. sp. LC5
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