STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FF80_03744Conjugative transfer protein TrbL. (453 aa)    
Predicted Functional Partners:
FF80_03741
Conjugative transfer protein TrbI.
 
  
 0.971
FF80_03743
Conjugative transfer protein TrbF.
 
  
 0.971
FF80_03742
Conjugal transfer protein TrbG.
 
  
 0.969
FF80_03746
Conjugative transfer protein TrbJ.
 
  
 0.964
FF80_03747
Conjugal transfer ATPase TrbE.
 
  
 0.962
FF80_03748
Conjugal transfer protein TrbD.
 
  
 0.962
FF80_03749
Conjugal transfer protein TrbC.
 
  
 0.961
FF80_03740
Hypothetical protein.
 
     0.947
FF80_03745
Hypothetical protein.
 
     0.921
FF80_03750
Conjugal transfer protein TrbB.
 
  
 0.905
Your Current Organism:
Devosia sp. LC5
NCBI taxonomy Id: 1502724
Other names: D. sp. LC5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.