STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV13224.1ATP-dependent helicase/nuclease subunit B. (1044 aa)    
Predicted Functional Partners:
SFU33964.1
DNA helicase/exodeoxyribonuclease V, subunit A; Belongs to the helicase family. UvrD subfamily.
 
  
 0.939
SFU99501.1
Endonuclease YncB, thermonuclease family.
   
  0.897
SFV10725.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
   
  0.897
SFV13233.1
Hypothetical protein.
 
  
  0.823
SFV13227.1
Hypothetical protein.
       0.819
SFV11598.1
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.796
SFU98856.1
DNA polymerase III, delta subunit.
 
   
 0.790
SFV16513.1
Hypothetical protein.
  
     0.744
SFU43661.1
Uncharacterized conserved protein, UPF0335 family; Belongs to the UPF0335 family.
  
     0.727
SFU93745.1
Hypothetical protein.
  
     0.725
Your Current Organism:
Methylobacterium sp. 174MFSha11
NCBI taxonomy Id: 1502749
Other names: M. sp. 174MFSha1.1, Methylobacterium sp. 174MFSha1.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.