STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI72404.1Two-component system, sensor histidine kinase YesM. (593 aa)    
Predicted Functional Partners:
SFI72430.1
Two-component system, response regulator YesN.
 
  0.995
SFJ68149.1
Two-component system, response regulator YesN.
  
 
  0.958
SFJ40113.1
Two-component system, response regulator YesN.
  
 
  0.954
SFJ49504.1
Two-component system, response regulator YesN.
  
 
  0.949
SFJ55654.1
Two-component system, response regulator YesN.
  
 
  0.944
SFI80685.1
Two-component system, response regulator YesN.
  
 
  0.934
SFJ56177.1
Two-component system, response regulator YesN.
  
 
  0.933
SFJ55125.1
Helix-turn-helix domain-containing protein.
  
 
  0.932
SFJ05298.1
Two-component system, response regulator YesN.
  
 
  0.930
SFJ85876.1
Helix-turn-helix domain-containing protein.
  
 
  0.929
Your Current Organism:
Paenibacillus sp. UNC496MF
NCBI taxonomy Id: 1502753
Other names: P. sp. UNC496MF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.