STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI81054.1RNA polymerase sigma-70 factor, ECF subfamily. (174 aa)    
Predicted Functional Partners:
SFI81075.1
Hypothetical protein.
       0.773
SFJ45581.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.758
SFJ13052.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.757
SFJ44664.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.754
SFJ49088.1
RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.750
SFI70640.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.746
SFI55430.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.738
SFJ12091.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.731
SFJ21185.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.636
SFJ32014.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.632
Your Current Organism:
Paenibacillus sp. UNC496MF
NCBI taxonomy Id: 1502753
Other names: P. sp. UNC496MF
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