Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI41430.1 | SFI89568.1 | SAMN02799624_00903 | SAMN02799624_02549 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Cupredoxin-like domain-containing protein. | 0.512 |
SFI55372.1 | SFI89568.1 | SAMN02799624_01345 | SAMN02799624_02549 | Hypothetical protein. | Cupredoxin-like domain-containing protein. | 0.554 |
SFI55372.1 | SFI94244.1 | SAMN02799624_01345 | SAMN02799624_02792 | Hypothetical protein. | Protein of unknown function. | 0.605 |
SFI55372.1 | SFJ03231.1 | SAMN02799624_01345 | SAMN02799624_03096 | Hypothetical protein. | Hypothetical protein. | 0.549 |
SFI55372.1 | SFJ76985.1 | SAMN02799624_01345 | SAMN02799624_05888 | Hypothetical protein. | Hypothetical protein. | 0.543 |
SFI74975.1 | SFI89568.1 | SAMN02799624_02003 | SAMN02799624_02549 | Small, acid-soluble spore protein, alpha/beta type. | Cupredoxin-like domain-containing protein. | 0.657 |
SFI89560.1 | SFI89568.1 | SAMN02799624_02548 | SAMN02799624_02549 | Toxin CptA. | Cupredoxin-like domain-containing protein. | 0.644 |
SFI89560.1 | SFI89593.1 | SAMN02799624_02548 | SAMN02799624_02550 | Toxin CptA. | Membrane protein DedA, SNARE-associated domain. | 0.494 |
SFI89568.1 | SFI41430.1 | SAMN02799624_02549 | SAMN02799624_00903 | Cupredoxin-like domain-containing protein. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.512 |
SFI89568.1 | SFI55372.1 | SAMN02799624_02549 | SAMN02799624_01345 | Cupredoxin-like domain-containing protein. | Hypothetical protein. | 0.554 |
SFI89568.1 | SFI74975.1 | SAMN02799624_02549 | SAMN02799624_02003 | Cupredoxin-like domain-containing protein. | Small, acid-soluble spore protein, alpha/beta type. | 0.657 |
SFI89568.1 | SFI89560.1 | SAMN02799624_02549 | SAMN02799624_02548 | Cupredoxin-like domain-containing protein. | Toxin CptA. | 0.644 |
SFI89568.1 | SFI89593.1 | SAMN02799624_02549 | SAMN02799624_02550 | Cupredoxin-like domain-containing protein. | Membrane protein DedA, SNARE-associated domain. | 0.578 |
SFI89568.1 | SFI94244.1 | SAMN02799624_02549 | SAMN02799624_02792 | Cupredoxin-like domain-containing protein. | Protein of unknown function. | 0.514 |
SFI89568.1 | SFJ02134.1 | SAMN02799624_02549 | SAMN02799624_03036 | Cupredoxin-like domain-containing protein. | Spore coat protein H. | 0.535 |
SFI89568.1 | SFJ03231.1 | SAMN02799624_02549 | SAMN02799624_03096 | Cupredoxin-like domain-containing protein. | Hypothetical protein. | 0.611 |
SFI89568.1 | SFJ76985.1 | SAMN02799624_02549 | SAMN02799624_05888 | Cupredoxin-like domain-containing protein. | Hypothetical protein. | 0.635 |
SFI89568.1 | SFJ89668.1 | SAMN02799624_02549 | SAMN02799624_06494 | Cupredoxin-like domain-containing protein. | KinB signaling pathway activation protein. | 0.544 |
SFI89593.1 | SFI89560.1 | SAMN02799624_02550 | SAMN02799624_02548 | Membrane protein DedA, SNARE-associated domain. | Toxin CptA. | 0.494 |
SFI89593.1 | SFI89568.1 | SAMN02799624_02550 | SAMN02799624_02549 | Membrane protein DedA, SNARE-associated domain. | Cupredoxin-like domain-containing protein. | 0.578 |
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