STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM98530.1Cytochrome c553. (116 aa)    
Predicted Functional Partners:
SEM98563.1
Cytochrome c553.
   
0.906
SEM93690.1
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
 
 
 0.844
SEM93634.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.815
SEM93672.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.786
SEM45933.1
Cytochrome c5.
 
  
 0.721
SEM85094.1
Uncharacterized membrane protein YckC, RDD family.
  
     0.625
SEM98600.1
Pheromone shutdown-related protein TraB.
       0.542
SEM98636.1
N-carbamoylputrescine amidase.
    
  0.526
SEM16146.1
Cytochrome c, mono-and diheme variants.
 
 
  0.517
SEM31655.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
 
  0.446
Your Current Organism:
Luteibacter sp. UNCMF331Sha31
NCBI taxonomy Id: 1502760
Other names: L. sp. UNCMF331Sha3.1, Luteibacter sp. UNCMF331Sha3.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.