STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN03256.12'-5' RNA ligase. (174 aa)    
Predicted Functional Partners:
SEN03230.1
AraC family transcriptional regulator.
       0.628
SEM82183.1
Protein of unknown function.
  
     0.488
bioD
Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
  
  
 0.470
SEM89045.1
Putative esterase.
  
  
 0.465
SEN32537.1
Ubiquitin-hydrolase Zn-finger-containing protein.
  
     0.433
SEN03199.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.426
Your Current Organism:
Luteibacter sp. UNCMF331Sha31
NCBI taxonomy Id: 1502760
Other names: L. sp. UNCMF331Sha3.1, Luteibacter sp. UNCMF331Sha3.1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.