STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW23043.1Sugar phosphate isomerase/epimerase. (279 aa)    
Predicted Functional Partners:
SFW23034.1
Predicted dehydrogenase.
 
 
  0.933
SFW34127.1
Predicted dehydrogenase.
  
 
  0.906
SFW43346.1
Predicted dehydrogenase.
  
 
  0.906
SFW22995.1
Predicted dehydrogenase.
  
 
  0.895
xylB
Xylulokinase.
  
 
  0.861
SFW26210.1
Gluconokinase; Belongs to the FGGY kinase family.
  
 
  0.791
SFW11764.1
Predicted dehydrogenase.
 
 
  0.712
SFW23003.1
Predicted dehydrogenase.
  
 
  0.710
SFW41498.1
Predicted dehydrogenase.
  
 
  0.710
SFW59729.1
Predicted dehydrogenase.
  
 
  0.710
Your Current Organism:
Paenibacillus sp. UNCCL117
NCBI taxonomy Id: 1502764
Other names: P. sp. UNCCL117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.