STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ13157.1Glutathione-independent formaldehyde dehydrogenase. (386 aa)    
Predicted Functional Partners:
SDQ13178.1
Threonine dehydrogenase.
 
  
 
0.826
SDQ26983.1
PTS system, fructose-specific IIC component.
  
 
  0.797
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
  
 
 0.733
SDQ13199.1
Hypothetical protein.
  
    0.681
SDQ33675.1
Threonine dehydratase.
   
 
  0.664
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.619
SDQ29930.1
Phosphoglucomutase.
   
 0.614
SDQ32581.1
Xylulokinase; Belongs to the FGGY kinase family.
  
 
 0.614
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
  0.599
SDQ90142.1
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
  0.599
Your Current Organism:
Curtobacterium sp. UNCCL20
NCBI taxonomy Id: 1502773
Other names: C. sp. UNCCL20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.